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Nirenberg and Leder found how to read codon order

In 1964 and 1965 Marshall Nirenberg's lab, with postdoc Philip Leder, devised a filter-binding method that revealed the exact letter order of genetic code words.

Marshall Nirenberg
Marshall Nirenberg · 1927–2010
Person
Marshall Nirenberg
Lived
1927–2010
Field
Biochemistry, genetics
From
American

The story

In 1961 Marshall Nirenberg and Heinrich Matthaei showed that a synthetic RNA made only of uracil directed the making of a protein made only of phenylalanine, revealing UUU as the first word of the genetic code. Further experiments soon showed that poly-C coded for proline and that poly-A coded for lysine. Then progress slowed. Long synthetic RNAs made from mixtures of two or more bases had their letters in random order, so they could show which letters made up a codon but not the order in which they came. With 64 possible three-letter combinations, Nirenberg's team needed a way to test each word individually.

In 1964 Philip Leder, a postdoctoral researcher in Nirenberg's laboratory, developed the answer, now known as the triplet binding assay. A tiny RNA of just three letters, a trinucleotide, was mixed with ribosomes. If its sequence matched, it would cause a particular transfer RNA, carrying its amino acid, to bind to the ribosome. Each transfer RNA was loaded with a radioactively labelled amino acid. The mixture was then poured through a nitrocellulose filter, which held back ribosomes but let free transfer RNA pass through. Any radioactivity caught on the filter revealed which amino acid that three-letter word specified. The National Library of Medicine describes the sophisticated filtration machine Leder built for the purpose.

The method gave quick, unambiguous answers. Leder found that GUU, UGU and UUG coded for valine, cysteine and leucine, showing that the order of letters mattered. Using the same approach, Merton Bernfield showed that UUU and UUC both coded for phenylalanine and that UCU and UCC both coded for serine, proving that the code is redundant, with several codons for one amino acid. The results appeared in 1964 in Science and in a series of papers in the Proceedings of the National Academy of Sciences.

The filter assay greatly sped up the work, and about 50 codons were assigned this way. Combined with the nucleic acid synthesis of Har Gobind Khorana, it allowed the code to be almost completely decoded by the 1966 Cold Spring Harbor Symposium, and that year Nirenberg announced he had deciphered the 64 codons for all twenty amino acids. Two years later he shared the Nobel Prize with Khorana and Robert Holley.

The dictionary their filter helped complete is the one every biologist, every genetic test and every genome analysis relies on today.

Why it matters

The method completed the genetic dictionary that every biologist and genetic test now relies on.

About Marshall Nirenberg

NIH biochemist who in 1961 read the first word of the genetic code, UUU for phenylalanine, then led the race to decipher all of it, sharing the 1968 Nobel Prize in Medicine.

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Marshall Nirenberg
1927–2010 · Biochemistry, genetics
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